| Group A | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | OSC Lille | 6 | 14 | 10 | 2 | 8 | 4 | 2 | 0 |
| 2. | SK Slovan Bratislava | 6 | 10 | 8 | 7 | 1 | 3 | 1 | 2 |
| 3. | Olimpija Ljubljana | 6 | 6 | 4 | 9 | -5 | 2 | 0 | 4 |
| 4. | KÍ Klaksvík | 6 | 4 | 5 | 9 | -4 | 1 | 1 | 4 |
| Group B | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Maccabi Tel Aviv | 6 | 15 | 14 | 9 | 5 | 5 | 0 | 1 |
| 2. | KAA Gent | 6 | 13 | 16 | 7 | 9 | 4 | 1 | 1 |
| 3. | FC Zorya Lugansk | 6 | 7 | 10 | 11 | -1 | 2 | 1 | 3 |
| 4. | Breidablik Kopavogur | 6 | 0 | 5 | 18 | -13 | 0 | 0 | 6 |
| Group C | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Viktoria Plzen | 6 | 18 | 9 | 1 | 8 | 6 | 0 | 0 |
| 2. | Dinamo Zagreb | 6 | 9 | 10 | 5 | 5 | 3 | 0 | 3 |
| 3. | FK Astana | 6 | 4 | 4 | 13 | -9 | 1 | 1 | 4 |
| 4. | KF Ballkani Suhareka | 6 | 4 | 3 | 7 | -4 | 1 | 1 | 4 |
| Group D | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Club Brugge | 6 | 16 | 15 | 3 | 12 | 5 | 1 | 0 |
| 2. | FK Bodö/Glimt | 6 | 10 | 11 | 8 | 3 | 3 | 1 | 2 |
| 3. | Besiktas Istanbul | 6 | 4 | 7 | 14 | -7 | 1 | 1 | 4 |
| 4. | FC Lugano | 6 | 4 | 6 | 14 | -8 | 1 | 1 | 4 |
| Group E | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Aston Villa | 6 | 13 | 12 | 7 | 5 | 4 | 1 | 1 |
| 2. | Legia Warschau | 6 | 12 | 10 | 6 | 4 | 4 | 0 | 2 |
| 3. | AZ Alkmaar | 6 | 6 | 7 | 12 | -5 | 2 | 0 | 4 |
| 4. | HŠK Zrinjski Mostar | 6 | 4 | 6 | 10 | -4 | 1 | 1 | 4 |
| Group F | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Fiorentina | 6 | 12 | 14 | 6 | 8 | 3 | 3 | 0 |
| 2. | Ferencvaros Budapest | 6 | 10 | 9 | 6 | 3 | 2 | 4 | 0 |
| 3. | KRC Genk | 6 | 9 | 8 | 5 | 3 | 2 | 3 | 1 |
| 4. | FK Čukarički | 6 | 0 | 2 | 16 | -14 | 0 | 0 | 6 |
| Group G | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | PAOK Saloniki | 6 | 16 | 16 | 10 | 6 | 5 | 1 | 0 |
| 2. | Eintracht Frankfurt | 6 | 9 | 11 | 7 | 4 | 3 | 0 | 3 |
| 3. | FC Aberdeen | 6 | 6 | 10 | 10 | 0 | 1 | 3 | 2 |
| 4. | HJK Helsinki | 6 | 2 | 7 | 17 | -10 | 0 | 2 | 4 |
| Group H | P | Pts | GF | GA | GD | w | d | l | |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Fenerbahce Istanbul | 6 | 12 | 13 | 11 | 2 | 4 | 0 | 2 |
| 2. | PFC Ludogorets Razgrad | 6 | 12 | 11 | 11 | 0 | 4 | 0 | 2 |
| 3. | FC Nordsjaelland | 6 | 10 | 17 | 7 | 10 | 3 | 1 | 2 |
| 4. | Spartak Trnava | 6 | 1 | 3 | 15 | -12 | 0 | 1 | 5 |